My LEDS connected to ports CE1 and CE0 are automatically on at startup. Is this normal? I have included a code that turns them all off when I run the script.
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Highly related: http://raspberrypi.stackexchange.com/q/32639/19949 – Ghanima Dec 12 '16 at 12:37
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Yes, it is normal.
GPIO 0-8 have their internal pulls to 3V3 enabled at boot. That will allow enough current to flow to dimly light a LED.

joan
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